PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1136080.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 488aa MW: 53180.7 Da PI: 6.4266 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36 | 1.2e-11 | 303 | 345 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Pd.00g1136080.m01 303 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 345 79*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 488 aa Download sequence |
MLPRLNGAVW MGDREDRDSA SWNRTTGATT NNSNCGVVER KDELGSLSTF KSMLDVDDDW 60 YLPNNSIQSH SDVRDIAFSP SFADPESLLL NPVDSSSSCS PSSSVFNNLD PNQVHYYLPQ 120 NSTLSSLLNV VPNNPLEHGF DLGCDIGFLD TQASSGSSLM NRGGGVLTGF SGLSSNNQMN 180 AQDLCSNLQF STTRLPQLLE NSSNFTGFRG FEDTSANALF PNRPKLLRPL DSIPDVGAPP 240 TLFQKRVQKN LADNGGNLDD FTENTKMDDG AKNGGNSSNA NSTVTGGGDH KGKKKGLPAK 300 NLMAERRRRK KLNDRLYMLR SVVPKISKMD RASILGDAIE YLKELLQKIN NLHNELESIP 360 PGSSLTPTGS TFHPLTPTPA TLPSRIKEEL CPSSLPSPNG QPARVEVRLR EGRAVNIHMF 420 CGRRPGLLLS TMRTLDSLGL DIQQAVISCF NGFAMDVFRA EQCKEGQDVH PDQIKAVLLE 480 SVGFHGLI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 293 | 311 | KKKGLPAKNLMAERRRRKK |
2 | 305 | 312 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.1 | 1e-128 | bHLH family protein |