PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1135430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 490aa MW: 54043.6 Da PI: 7.9228

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1135430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	106.9	1.1e-33	111	171	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s +tkfCy+nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+ss Pd.00g1135430.m01 111 PDKVLPCPRCNSLKTKFCYFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSS 171 78999****************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MSAVRDPAIK LFGRNILVPE RQIPDMSAHN SNEECWVADM PKAGMGECRE MEDPSVKVSC 60 KQDQFFELDK GSENNHHGQI LENEGEVDCN PEEDYIASDT DDGKEKSFTK PDKVLPCPRC 120 NSLKTKFCYF NNYSVYQPRH FCKSCRRYWT AGGTIRNLPL GTRRHRNKHS SSQYQVVGEP 180 SAVPVTQGDT LNFVGQQHLL PVQLPASPKP VNGMREVLNS GIDTVLVESI ATALNHKNQK 240 RSSKDGCAAA GDNSEEPLSS SSSLTATTSQ KNACLGKEME QVDLPRYGND YNLTYTEQYF 300 PLPQWAENSS WGMMMFGPHS NNPNPSHMGS LPMVTVPGFC IPSFIFPIAP SSYQGYMPSS 360 DAKKWNAQLV GSDGSLSPSS SNGNSRCSGN SSPRSGKYSR DANVPAGMKT KRCLWVPKTL 420 RIDDPDEAAK SSIWSTLCIK PDKNAPILRG GIFKAFQKKS DTKSQTPNAD RVLQANPAAH 480 SHSQLFQVTM

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MSAVRDPAIK LFGRNILVPE RQIPDMSAHN SNEECWVADM PKAGMGECRE MEDPSVKVSC  60
KQDQFFELDK GSENNHHGQI LENEGEVDCN PEEDYIASDT DDGKEKSFTK PDKVLPCPRC  120
NSLKTKFCYF NNYSVYQPRH FCKSCRRYWT AGGTIRNLPL GTRRHRNKHS SSQYQVVGEP  180
SAVPVTQGDT LNFVGQQHLL PVQLPASPKP VNGMREVLNS GIDTVLVESI ATALNHKNQK  240
RSSKDGCAAA GDNSEEPLSS SSSLTATTSQ KNACLGKEME QVDLPRYGND YNLTYTEQYF  300
PLPQWAENSS WGMMMFGPHS NNPNPSHMGS LPMVTVPGFC IPSFIFPIAP SSYQGYMPSS  360
DAKKWNAQLV GSDGSLSPSS SNGNSRCSGN SSPRSGKYSR DANVPAGMKT KRCLWVPKTL  420
RIDDPDEAAK SSIWSTLCIK PDKNAPILRG GIFKAFQKKS DTKSQTPNAD RVLQANPAAH  480
SHSQLFQVTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	8e-36	Dof family protein