PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1134170.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 249aa MW: 27634.1 Da PI: 4.7397 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 26.7 | 9.3e-09 | 84 | 118 | 1 | 38 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 r ++sL+llt+kf++l++++e+gi++ln++a++L + Pd.00g1134170.m01 84 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 118 6789*****************************9...3 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVLVTDLKRK SDAADYEAES SDRTAAPGYT EAVTSPLQTP VSSKVGKANK TSRLTKCSRS 60 GPQTPASNVG SPSGPNLTPA GPCRFDSSLG LLTKKFINLI KHAEDGILDL NNAADTLEVT 120 TFLSVVMFEK QDGVVLMATT GNLKQIDEAL QRPGRMDRDE DNKEKEAARF AQLWNKIISS 180 FREEDLISDS EEELKGSNGL DEDLRLWASY RGQTLTRTVR GMMYYRKALE LQAFLDMAQD 240 DDLLLFRWD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.3 | 3e-31 | E2F/DP family protein |