PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1132390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 380aa MW: 41059.1 Da PI: 7.6876

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1132390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.8	2.4e-38	31	90	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++r vPvG+grrknk+ Pd.00g1132390.m01 31 PDKVLPCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRSVPVGAGRRKNKHL 90 78999*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MQVNEARVNA KTNSKQAENR ILNQEKDFQK PDKVLPCPRC NSLDTKFCYF NNYNVNQPRH 60 FCKNCQRYWT AGGTMRSVPV GAGRRKNKHL ASQYHQIIVS SDGVPSTRLE TTDSINHQLL 120 ACGESSSTFG LPDRAGTVLK FGHEAPLCES MDTVVNLRDP GTCVEISSVS GRESGDEPSC 180 VSSVTASGNQ GSELPKNILQ RDGIGLQGSC SEPSISHPLN YYPVAPLVFP WSPGWRNAAS 240 PAAPQHSQSI CVQNCTAPNQ VQWYPTPVLV VPGPCPQSIP LQTVPAPYWG CMPVCPAGMG 300 NVSLSGSNSC FSPSSSTSNS CCSGNGSPTL GKHSRDSNIM DEEKSENRVL VPKPLRVDDP 360 DEASKSPIWA SLGIKHDLKT

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MQVNEARVNA KTNSKQAENR ILNQEKDFQK PDKVLPCPRC NSLDTKFCYF NNYNVNQPRH  60
FCKNCQRYWT AGGTMRSVPV GAGRRKNKHL ASQYHQIIVS SDGVPSTRLE TTDSINHQLL  120
ACGESSSTFG LPDRAGTVLK FGHEAPLCES MDTVVNLRDP GTCVEISSVS GRESGDEPSC  180
VSSVTASGNQ GSELPKNILQ RDGIGLQGSC SEPSISHPLN YYPVAPLVFP WSPGWRNAAS  240
PAAPQHSQSI CVQNCTAPNQ VQWYPTPVLV VPGPCPQSIP LQTVPAPYWG CMPVCPAGMG  300
NVSLSGSNSC FSPSSSTSNS CCSGNGSPTL GKHSRDSNIM DEEKSENRVL VPKPLRVDDP  360
DEASKSPIWA SLGIKHDLKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-54	Dof family protein