PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1131500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 301aa MW: 33458.8 Da PI: 9.9093 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48 | 2.3e-15 | 126 | 172 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ L++l+P+a K +Ka++L ++++Y+ +Lq Pd.00g1131500.m01 126 VHNQSERKRRDRINQKMKALQRLVPNA-----SKTDKASMLDEVIKYLEQLQ 172 6*************************9.....7******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 301 aa Download sequence |
MQQNHPNTSR LVPLSNYDIR ELKLENGQLA MHGLGGLLPT SQAKHTWGRA GDTLESVVHQ 60 ATHHKREPNL IHNGQTPANI SSMVASSGRT WTDEGGQENQ DDGQETTKDG ESGRSRSTRP 120 KRAAAVHNQS ERKRRDRINQ KMKALQRLVP NASKTDKASM LDEVIKYLEQ LQAQVQMMSS 180 VRNMPHMNMN MNMMMPLGMQ QQQHLHQMSF LAHMGMGAAP TFIPPFMVPP LMPRHPPSQA 240 KPDPACTNAS DPLPDPYGAL LAQQSMNMDL FNKMAALYHQ QVNHTTSATS SPSQSNHVQG 300 N |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 131 | 136 | ERKRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00050.1 | 8e-39 | bHLH family protein |