PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1131390.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 725aa MW: 81507.8 Da PI: 4.3365

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1131390.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.9	2e-07	459	507	2	47
SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 +rW++eE++l+ ++v + lG++ W+ + ++ Rt k+++s+++++ Pd.00g1131390.m02 459 QRWSEEEEQLFHQVVfsnsASLGKNFWDNLSTVFP-SRTKKEIVSYYFNV 507 79***********6666678888******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MSCSIFQVLA HNLIDRLPIN LAKLESLKVM TLDANRVTSL PDELGQLVRL EQLSISGNSL 60 QYLPETIGSL RNLKLLNVSN NKLKSLPESI GSCFSLEELQ ADDNSIEDLP ESVCNLVHLK 120 ALCLNNNNVK QIPTNLLKDC KALQNISLHG NPISMDQFQQ MEGFQEFEAR RKKNMTLTFL 180 KQGKRVNAVQ IFIEVKQFCP LVAFRIELLS SNSAICFISR RLFFEFNMVQ KRPLDDEQIF 240 VSFKHPRQVG HSKELVSFSE SVFPEDVSKK PQTLGGEDVE TSAPGSFTIS SWTTSSTSEE 300 DSLLEAPFHG SFPDCFNPER PIRTLAQSED IYSFLLDHPP RKSVSIGPEH QADVPLWDAQ 360 GTNNNSNNLD TSKAVSNSDL EDEKRLMGTC VIPMPDSDLS ADTGCIVGIG RTDCSCEDED 420 SVRCVRQHIS EAREKLIKTI GPKRFEELGF SDMGEQVAQR WSEEEEQLFH QVVFSNSASL 480 GKNFWDNLST VFPSRTKKEI VSYYFNVFML VKRAGQNRYD PINVDSDNDE WQGSNDYGDN 540 QLAVTEDEDS VVESPICQNV PGYYQSWKDN LQEYDEEVVD DTCDDNVNVD VFGGGTKQIL 600 DRCYGLVDNC STCPIAQLQD KISWDEKGDQ EVQDDSCTSF DAAAASQENQ LKSEEGNHWS 660 GGFNGSSNRG DHEYVLEPCD TKIWDAGYMT CPENKVDFLP TCNMIEEVFG KESWNYKARD 720 GKNLG

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MSCSIFQVLA HNLIDRLPIN LAKLESLKVM TLDANRVTSL PDELGQLVRL EQLSISGNSL  60
QYLPETIGSL RNLKLLNVSN NKLKSLPESI GSCFSLEELQ ADDNSIEDLP ESVCNLVHLK  120
ALCLNNNNVK QIPTNLLKDC KALQNISLHG NPISMDQFQQ MEGFQEFEAR RKKNMTLTFL  180
KQGKRVNAVQ IFIEVKQFCP LVAFRIELLS SNSAICFISR RLFFEFNMVQ KRPLDDEQIF  240
VSFKHPRQVG HSKELVSFSE SVFPEDVSKK PQTLGGEDVE TSAPGSFTIS SWTTSSTSEE  300
DSLLEAPFHG SFPDCFNPER PIRTLAQSED IYSFLLDHPP RKSVSIGPEH QADVPLWDAQ  360
GTNNNSNNLD TSKAVSNSDL EDEKRLMGTC VIPMPDSDLS ADTGCIVGIG RTDCSCEDED  420
SVRCVRQHIS EAREKLIKTI GPKRFEELGF SDMGEQVAQR WSEEEEQLFH QVVFSNSASL  480
GKNFWDNLST VFPSRTKKEI VSYYFNVFML VKRAGQNRYD PINVDSDNDE WQGSNDYGDN  540
QLAVTEDEDS VVESPICQNV PGYYQSWKDN LQEYDEEVVD DTCDDNVNVD VFGGGTKQIL  600
DRCYGLVDNC STCPIAQLQD KISWDEKGDQ EVQDDSCTSF DAAAASQENQ LKSEEGNHWS  660
GGFNGSSNRG DHEYVLEPCD TKIWDAGYMT CPENKVDFLP TCNMIEEVFG KESWNYKARD  720
GKNLG