PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1131390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 750aa MW: 84399.9 Da PI: 4.3275

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1131390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.8	2.1e-07	484	532	2	47
SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 +rW++eE++l+ ++v + lG++ W+ + ++ Rt k+++s+++++ Pd.00g1131390.m01 484 QRWSEEEEQLFHQVVfsnsASLGKNFWDNLSTVFP-SRTKKEIVSYYFNV 532 79***********6666678888******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MSCSIFQVLA HNLIDRLPIN LAKLESLKVM TLDANRVTSL PDELGQLVRL EQLSISGNSL 60 QYLPETIGSL RNLKLLNVSN NKLKSLPESI GSCFSLEELQ ADDNSIEDLP ESVCNLVHLK 120 ALCLNNNNVK QIPTNLLKDC KALQNISLHG NPISMDQFQQ MEGFQEFEAR RKKNMTLTFL 180 KQGKRVNAVQ IFIEVKQFCP LVAFRIELLS SNSAICFISR RLFFEFNMVQ KRPLDDEQIF 240 VSFKHPRQVG HSKELVSFSE SVFPEDVSKK PQTLENGWAK DNDKGEEKLS DDIFSDLRKG 300 GEDVETSAPG SFTISSWTTS STSEEDSLLE APFHGSFPDC FNPERPIRTL AQSEDIYSFL 360 LDHPPRKSVS IGPEHQADVP LWDAQGTNNN SNNLDTSKAV SNSDLEDEKR LMGTCVIPMP 420 DSDLSADTGC IVGIGRTDCS CEDEDSVRCV RQHISEAREK LIKTIGPKRF EELGFSDMGE 480 QVAQRWSEEE EQLFHQVVFS NSASLGKNFW DNLSTVFPSR TKKEIVSYYF NVFMLVKRAG 540 QNRYDPINVD SDNDEWQGSN DYGDNQLAVT EDEDSVVESP ICQNVPGYYQ SWKDNLQEYD 600 EEVVDDTCDD NVNVDVFGGG TKQILDRCYG LVDNCSTCPI AQLQDKISWD EKGDQEVQDD 660 SCTSFDAAAA SQENQLKSEE GNHWSGGFNG SSNRGDHEYV LEPCDTKIWD AGYMTCPENK 720 VDFLPTCNMI EEVFGKESWN YKARDGKNLG

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MSCSIFQVLA HNLIDRLPIN LAKLESLKVM TLDANRVTSL PDELGQLVRL EQLSISGNSL  60
QYLPETIGSL RNLKLLNVSN NKLKSLPESI GSCFSLEELQ ADDNSIEDLP ESVCNLVHLK  120
ALCLNNNNVK QIPTNLLKDC KALQNISLHG NPISMDQFQQ MEGFQEFEAR RKKNMTLTFL  180
KQGKRVNAVQ IFIEVKQFCP LVAFRIELLS SNSAICFISR RLFFEFNMVQ KRPLDDEQIF  240
VSFKHPRQVG HSKELVSFSE SVFPEDVSKK PQTLENGWAK DNDKGEEKLS DDIFSDLRKG  300
GEDVETSAPG SFTISSWTTS STSEEDSLLE APFHGSFPDC FNPERPIRTL AQSEDIYSFL  360
LDHPPRKSVS IGPEHQADVP LWDAQGTNNN SNNLDTSKAV SNSDLEDEKR LMGTCVIPMP  420
DSDLSADTGC IVGIGRTDCS CEDEDSVRCV RQHISEAREK LIKTIGPKRF EELGFSDMGE  480
QVAQRWSEEE EQLFHQVVFS NSASLGKNFW DNLSTVFPSR TKKEIVSYYF NVFMLVKRAG  540
QNRYDPINVD SDNDEWQGSN DYGDNQLAVT EDEDSVVESP ICQNVPGYYQ SWKDNLQEYD  600
EEVVDDTCDD NVNVDVFGGG TKQILDRCYG LVDNCSTCPI AQLQDKISWD EKGDQEVQDD  660
SCTSFDAAAA SQENQLKSEE GNHWSGGFNG SSNRGDHEYV LEPCDTKIWD AGYMTCPENK  720
VDFLPTCNMI EEVFGKESWN YKARDGKNLG