PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1131260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 396aa    MW: 42740.5 Da    PI: 6.2509
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1131260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.8e-10237285355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Pd.00g1131260.m01 237 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 285
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MTMSSVSMIK PSNGADPFFG SGWDPFVSLS LSDNFGGSSV VSHREFSNPP YPVALENPGM  60
SSNSHLVQYP SDSSYVEMVP KLPCFGSGSF SEMVGSFGLS ECAQIANPGS VANYNPNREG  120
GTERTSTIGA QSHNDHQISE EGALGSSPNG KKRKRVPESN SAFSPNKNAE GEINKDLSGE  180
SSDYLKEQDE KKAKGEDNTA ANLRGKQMGK QAKESSQSGD PKDSYIHVRA RRGQATNSHS  240
LAERVRREKI SERMRLLQEL VPGCNKITGK AVMLDEIINY VQSLQQQVEF LSMKLATVNP  300
ELNIDIERIL SKDILNSRSG SGAIFGFSPG ISSSHPYPHG MFPGNLPSMP SSAPQFPSLP  360
QTLLDSELQG IFHMGFDSSS AIDNLGQNAG RLKSEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-88bHLH family protein