PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1130530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 363aa MW: 40526.2 Da PI: 4.6172

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1130530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111	8.3e-35	42	133	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k++e++ed++++ ++sws+ nsfvv+d+++f++++Lp+yFkh nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+++l Pd.00g1130530.m01 42 FLTKTFEMVEDPSTDAIVSWSRARNSFVVWDSHKFSTTLLPRYFKHGNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHL 124 9**************************************************************999.........*********** PP XXXXXXXXX CS HSF_DNA-bind 94 lekikrkks 102 l++ikr+++ Pd.00g1130530.m01 125 LKTIKRRRH 133 ****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDGVVVKEEE IVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS 60 WSRARNSFVV WDSHKFSTTL LPRYFKHGNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG 120 QRHLLKTIKR RRHVSQSMQQ EGGGGACVEL GQYGLETELE RLKRDRNVLM TEIVRLRQQQ 180 QNSKEQVMAM EGRLQTTEKK QQQIMAFLAK ALNSPSFIQN LVEKKARNKE LRGMEIGRKR 240 RLAASPSVEN LQEKPKTHVV DYSASQDQGE LETMESQIET FFSAAALDNE SSSDIIDPHS 300 SSVGGNLGIV NETTWEELWS DELIGGNPEE DVIVVGDESD IDVAVEDLVA EPADWGGPAD 360 GDL

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDGVVVKEEE IVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS  60
WSRARNSFVV WDSHKFSTTL LPRYFKHGNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG  120
QRHLLKTIKR RRHVSQSMQQ EGGGGACVEL GQYGLETELE RLKRDRNVLM TEIVRLRQQQ  180
QNSKEQVMAM EGRLQTTEKK QQQIMAFLAK ALNSPSFIQN LVEKKARNKE LRGMEIGRKR  240
RLAASPSVEN LQEKPKTHVV DYSASQDQGE LETMESQIET FFSAAALDNE SSSDIIDPHS  300
SSVGGNLGIV NETTWEELWS DELIGGNPEE DVIVVGDESD IDVAVEDLVA EPADWGGPAD  360
GDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	131	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-123	HSF family protein