PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1128640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 254aa    MW: 27808.7 Da    PI: 4.611
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1128640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-1863113155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Pd.00g1128640.m01  63 PVYRGVRMRT-WGKWVSEIREPRK---KNRIWLGTFSTPEMAARAHDVAALCIKG 113
                        68*****998.**********854...59***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MADPTNSETE SSFNSPSSPS PSSSGFSQSL PNSAQNPLPG SSESPDPDQK RAKRARETSS  60
KHPVYRGVRM RTWGKWVSEI REPRKKNRIW LGTFSTPEMA ARAHDVAALC IKGNSAILNF  120
PGLAGSLPRP ESNSPRDIQT AAAKAASMEI TLNAAPPPSH TTSGDAGTPE ELSEIVELPS  180
LGTSYESAES GNEFVFVDSV EGWLYPPPWW HNSYFEEEYG YNSIINDIRD DQMLMPEPPA  240
AAECFVDALL WQQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-67ERF family protein