PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1126510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 276aa    MW: 29870.8 Da    PI: 7.0849
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1126510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.8e-31100158259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp+++++tY+ eHnh+
  Pd.00g1126510.m01 100 ADIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNRSDPNMFIVTYTAEHNHP 158
                        69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MEDDWDLQAV VRGCSTGTTT SNRSTATSNS NNSTCFKISN FHSSPAFSSS FGTATLQPGL  60
QQQQFQPSSH SVSSTTTPRS KKRKNQLKKV CQVPAESLSA DIWAWRKYGQ KPIKGSPYPR  120
GYYRCSSSKG CMARKQVERN RSDPNMFIVT YTAEHNHPAP THRNSLAGST RQKPFSPQTV  180
TGSDSTKPTS PATSASVDED PGVPQSTTME SFKEEKGSPM VDDDDDELFG MCDSVVSDDF  240
FVGLEGLAGD YFSDHSPTSF GVPWVSSNAA TAAGSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.17e-72WRKY family protein