PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1125840.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 649aa MW: 72661.1 Da PI: 4.8633

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1125840.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.4	0.00014	465	498	17	55
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 N+++ Lr+++P+ + ++Ka++L +++Y+k+L+ Pd.00g1125840.m01 465 NEKLLVLRSMVPSiS------EVDKASVLDDTIKYLKELE 498 89999******66......8*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MANGTQNHER VPENLRKQFA VAVRSIKWSY AIFWSLSTSQ QGVLEWCEGY YNGDIKTRKT 60 VEGVELKTDK MGLERNAQLR ELYKSLLEGE TEPQAKAPSA ALNPEDLSDA EWYYLLCMSF 120 VFNPGEGLPG RALANGQTIW LCDAQYADSK VFSRSLLAKS ASIQTVVCFP YLGGVVELGV 180 TELVPEDLSL IQHIKASLLD FSKPDCSEKS SSAPHKADDD SDQVLAKVDH EIVDTLALEN 240 LYSPSEEIKF DPMGINDLHG NHEEFNMDSP EECSNGCEHN HQTEDSFMPE GINDGASQVQ 300 SWHFMDEDFS IGVQDSMNSS DCISEAFVNK KRAHSSPRHE SVNRNHLKEL QNFNDTKFSS 360 LDLGPADDHI HYTRTLSNIL GSSTRLTENP CSCDGDCKSS FVTWKKGVVD NCRPTVHQKI 420 LKKILFTVPL MCGASSQNTI QDGLSKLQSD DIHKGHVMPD KLKENEKLLV LRSMVPSISE 480 VDKASVLDDT IKYLKELEAR AEEMESCMDT VEAIARRKYL DSAEKTSDNY DKINMDNVKK 540 PWLNKRKACD IDEADPDLNR LVPRESLPLD VKVILKEQEV LIEMRCPYRE YILLDIMAAI 600 NNLYLDAHSV QSSTLDGVLT LSLTSKFRGA AVAPVGMIKQ ALWKIAGKC

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MANGTQNHER VPENLRKQFA VAVRSIKWSY AIFWSLSTSQ QGVLEWCEGY YNGDIKTRKT  60
VEGVELKTDK MGLERNAQLR ELYKSLLEGE TEPQAKAPSA ALNPEDLSDA EWYYLLCMSF  120
VFNPGEGLPG RALANGQTIW LCDAQYADSK VFSRSLLAKS ASIQTVVCFP YLGGVVELGV  180
TELVPEDLSL IQHIKASLLD FSKPDCSEKS SSAPHKADDD SDQVLAKVDH EIVDTLALEN  240
LYSPSEEIKF DPMGINDLHG NHEEFNMDSP EECSNGCEHN HQTEDSFMPE GINDGASQVQ  300
SWHFMDEDFS IGVQDSMNSS DCISEAFVNK KRAHSSPRHE SVNRNHLKEL QNFNDTKFSS  360
LDLGPADDHI HYTRTLSNIL GSSTRLTENP CSCDGDCKSS FVTWKKGVVD NCRPTVHQKI  420
LKKILFTVPL MCGASSQNTI QDGLSKLQSD DIHKGHVMPD KLKENEKLLV LRSMVPSISE  480
VDKASVLDDT IKYLKELEAR AEEMESCMDT VEAIARRKYL DSAEKTSDNY DKINMDNVKK  540
PWLNKRKACD IDEADPDLNR LVPRESLPLD VKVILKEQEV LIEMRCPYRE YILLDIMAAI  600
NNLYLDAHSV QSSTLDGVLT LSLTSKFRGA AVAPVGMIKQ ALWKIAGKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-155	bHLH family protein