PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1125010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 551aa MW: 61210.8 Da PI: 9.1764 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5.3e-18 | 59 | 105 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd+l++++v++ G++ W+ Ia+ ++ gR +kqc++rw+++l Pd.00g1125010.m01 59 KGFWSKEEDDLIIELVAKQGNKKWSEIAKSLP-GRIGKQCRERWHNHL 105 688*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.2e-15 | 111 | 153 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ E++ l++a+k +G++ W+ Ia+ + gR+++++k++w+ Pd.00g1125010.m01 111 RTAWTKAEELTLIEAHKIYGNK-WAEIAKFLH-GRSENSIKNHWN 153 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 551 aa Download sequence |
MVQVKEFDGN LKEEGLVSLS PSVSGSTCDN AVLNLASLQG TDVQCLHRWQ KVLNPDLVKG 60 FWSKEEDDLI IELVAKQGNK KWSEIAKSLP GRIGKQCRER WHNHLNPDIK RTAWTKAEEL 120 TLIEAHKIYG NKWAEIAKFL HGRSENSIKN HWNSSVKKKL ELRSSHASDM GTQNIKSESR 180 KREVVKQGLD QKANMERNVE TCSLDLNLVL GTANRRESQM QSSDKGNCGW LTKGAAANKM 240 MKTPPRTVFY DRAAAACGLN IEQCQETFSN CGRLRDSHNV TANNHYNSIC NAAPDYLGFP 300 FSHTRNHKPS DPIHLLPSRP LPRPPQASLN AGLGVPGCKR TAGYFINKPV LPVTAQGLYE 360 SSSGPQAYEK KKDGGAPVNS KNSSHGRLCY RPFQLEDVEF YLENGEFPST DSYIQTECSS 420 VSFCTPTSHD TRIFVDCNSP DSTLRSAART FEKSPSIIRK RQHSVSRKSV NAANHGDSVC 480 SKEISNNFRN SPHLLGLSPC GRTNSSSMVH SPPRSQKFGD SAVMKSVEKR LEHAFDVEWD 540 SASAVSRTLS P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.1 | 1e-61 | MYB family protein |