PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1123060.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 872aa MW: 99127.7 Da PI: 6.7655

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1123060.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	99.2	4.4e-31	81	168	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g+i++r+ vCs+eg+r++ ++ +++r+r++tr+gCka+++vkk+++g+w v+kl++eHnHel+p Pd.00g1123060.m01 81 FYNSYARRIGFSTRVSVYQRSRRDGSIICRQVVCSREGFRRDGGEN--RSKRQRTVTRVGCKAQMTVKKQSSGRWAVSKLVKEHNHELVP 168 9***************************************9988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 872 aa Download sequence
MDFEPLNIEN EAVEFDMGGS GEDDATALDL EHPDDSYDIF DDDLVQSSNS TRSRDDLGCG 60 DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR 120 RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH 180 VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGDQ 240 DRIIRAAVGQ VFPGTRHRFC KWNVLREAQE KLSDIYHSHP TFEAEFQRCI NMTETIDEFE 300 SCWESLLQRY DIGDNEWLQS MYDARQQWVP VFLRDTFFGE MSVTQGSDNI NSYFDGYINA 360 STNIQVLIKQ YEKAIATRHE KEVKADYDTM NISPILRTPS PMEKQAAKLY TRVVFMKFQE 420 ELVETLAYPA TMVDDTGSET VYRVAKFGED RKVYFVREAI KYVEEGAESV RVYNVAMDAL 480 HEAASEVTAA KKHGLGVVQS TSINCSQQLQ SCTVDQDKKI KELAAELDIA SQQCEAYRAK 540 LLAILKDMEE QKLKISVNVR NAANTTTVSA MDAFEKLEKV GEGTYGKVYR AREKATGKIV 600 ALKKTRLHED EEGVPPTTLR EVSILRMLSR DPHIVRLMDV KQGQNKEGKT VLYLVFEYMD 660 TDLKKYIRTF RQSGEYIPSP IVKSLMYQLC KGVAFCHGHG ILHRDLKPHN LLMDRKTMML 720 KIADLGLARA FTVPLRKYTH EILTLWYRAP EVLLGATHYS TAVDIWSVGC IFAELVTKQA 780 LFPGDSELQQ LLHIFRLLGT PNEEVWPGVS KLMNWHEYPQ WSPQSLSKAV PNLDVMGLDL 840 LLQMLQYEPA KRISAKKAME HPYFDDLNKA SL

Sequence ? help Back to Top

Protein Sequence Length: 872 aa Download sequence

MDFEPLNIEN EAVEFDMGGS GEDDATALDL EHPDDSYDIF DDDLVQSSNS TRSRDDLGCG  60
DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR  120
RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH  180
VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGDQ  240
DRIIRAAVGQ VFPGTRHRFC KWNVLREAQE KLSDIYHSHP TFEAEFQRCI NMTETIDEFE  300
SCWESLLQRY DIGDNEWLQS MYDARQQWVP VFLRDTFFGE MSVTQGSDNI NSYFDGYINA  360
STNIQVLIKQ YEKAIATRHE KEVKADYDTM NISPILRTPS PMEKQAAKLY TRVVFMKFQE  420
ELVETLAYPA TMVDDTGSET VYRVAKFGED RKVYFVREAI KYVEEGAESV RVYNVAMDAL  480
HEAASEVTAA KKHGLGVVQS TSINCSQQLQ SCTVDQDKKI KELAAELDIA SQQCEAYRAK  540
LLAILKDMEE QKLKISVNVR NAANTTTVSA MDAFEKLEKV GEGTYGKVYR AREKATGKIV  600
ALKKTRLHED EEGVPPTTLR EVSILRMLSR DPHIVRLMDV KQGQNKEGKT VLYLVFEYMD  660
TDLKKYIRTF RQSGEYIPSP IVKSLMYQLC KGVAFCHGHG ILHRDLKPHN LLMDRKTMML  720
KIADLGLARA FTVPLRKYTH EILTLWYRAP EVLLGATHYS TAVDIWSVGC IFAELVTKQA  780
LFPGDSELQQ LLHIFRLLGT PNEEVWPGVS KLMNWHEYPQ WSPQSLSKAV PNLDVMGLDL  840
LLQMLQYEPA KRISAKKAME HPYFDDLNKA SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-94	FAR1 family protein