PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1123030.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 206aa MW: 22322.5 Da PI: 8.7195 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 27.4 | 5.5e-09 | 131 | 164 | 1 | 34 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeL 34 r ++sL+llt+kf++l++++e+gi++ln++a++L Pd.00g1123030.m01 131 RFDSSLGLLTKKFINLFKHAEDGILDLNNAADTL 164 6789*****************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MSSITALKFR EIGVFLVDQG GPDLSLTEDG CKLPLSTCSD ALRSVSRRGG WWWLKRKSDA 60 ADYEAESSDR TAAPGYTEAV TSPFQTPVSS KVGKANKTSR LTKCSRSGPQ TPASNVGSPS 120 GPNLTPAGPC RFDSSLGLLT KKFINLFKHA EDGILDLNNA ADTLELVNIA KVVMVCSKSY 180 LQTVIAYDIR MPHTDFLIKY KTVLLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.3 | 1e-29 | E2F/DP family protein |