PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1117170.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 198aa    MW: 22545.4 Da    PI: 5.3765
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1117170.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.7e-1372123155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        r+ +hn+ Er RR+++Ns ++  r+llP +   ++kKls   +  ++ +YI +Lq
  Pd.00g1117170.m01  72 RKLNHNASERDRRKKVNSLYSSMRSLLPAD---QAKKLSIPNTISRVLKYIPELQ 123
                        6889**************************...*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MLALSPPVFS TVGWPSEDPI GYDQNYFYRD SSTDQTAESF LHILPSQLPQ FELDLSTTIS  60
GDNSSGSTVV ARKLNHNASE RDRRKKVNSL YSSMRSLLPA DQAKKLSIPN TISRVLKYIP  120
ELQKQVEGLI RKREELLSRA SKQEDILLNL EEEGLQVLNA SLLESSGERV FYNLHLQVER  180
SYRLECENLS EKLMSFYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-49bHLH family protein