PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1117130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 232aa    MW: 26162.8 Da    PI: 7.0762
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1117130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.21.9e-1566118155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                        ++ +hn  Er RR++iN+ +++Lr+llP  +   + kKls ++   +Av+YI +Lq
  Pd.00g1117130.m01  66 KKLNHNVSERDRRKKINTLYSTLRSLLPAsD---QMKKLSNSAAISRAVKYIPELQ 118
                        6789*************************66...9999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MALSPFIIGL ALEENSINHN RTMMINEGNE SAESFLHCLS PHQQVDQFEL TPSSPMSSGG  60
ELTVVKKLNH NVSERDRRKK INTLYSTLRS LLPASDQMKK LSNSAAISRA VKYIPELQQQ  120
VKGLIQKKEE LLSRLRRLQQ QGDPIYNEKQ SRSVALSSLS ASAFAVSWLN DREVVLQISS  180
YVVQKSPFSQ ILVDLEEDGL LLLNASSFES FEGRLFYSLH LQVQELTNII FP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-35bHLH family protein