PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1116910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 26124.6 Da PI: 6.9382 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.9 | 6.4e-12 | 82 | 128 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N++f eL ++l + + +K +Ka+iL Av+ +++L Pd.00g1116910.m01 82 KACREKMRRDRLNDRFLELSSMLEPG---RPPKTDKAAILGDAVRVVNQL 128 678**********************8...89***************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MGSPPQNHNW VFDYGVLEDI PVPGGDLPPL DLPGFTWPSH SFVAPAAPSV DFDDSFGNSD 60 SIKESGCRKR VRSGSCNVTG SKACREKMRR DRLNDRFLEL SSMLEPGRPP KTDKAAILGD 120 AVRVVNQLRG EAQQLKDSNG DLQEKINELK AEKNELRDEK QRLKTEKENI ERQIKALNTQ 180 PGFLSHPAAI PGPFSAPGQV VGGKLMPFVG YPGVSMWQFM PPAAVDTSQD HVLRPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 4e-91 | bHLH family protein |