PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1116700.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 327aa MW: 34932.4 Da PI: 6.3114 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.3 | 0.00032 | 236 | 256 | 34 | 54 |
TTS-STCHHHHHHHHHHHHHH CS HLH 34 pskKlsKaeiLekAveYIksL 54 p K + a++L +A+eYIk L Pd.00g1116700.m01 236 PTFKTDTASVLHEAIEYIKFL 256 666999*************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 327 aa Download sequence |
MAEEFQAGIC GSSWWNTSRH ALVASPCSVG FIDHMGSFGC PNDMVDIKAS RSSCGFDHSS 60 SSSSTPSDLN QALLLSRSGG GRAESNFHNS MLQEGVGVDE DSSSLIDGFK PMSQDFSLDQ 120 LGSSSSSGFP ITSSSSAANS YGFPSTFLQT ATALNHGNGI RSSNGLFSSS QSQFTAPASS 180 ALVHEHKPNS HNFTTKGNTN EDVQDSNSVV KKSGSSMSSC EPVFKRARIE TPSPLPTFKT 240 DTASVLHEAI EYIKFLHEQV SVLSTPYMKN GAPMQHQQGS DHKMKEAEGA KHDLKSRGLC 300 LVPISSTFPV ANETTDFWTP TFGATFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61660.4 | 1e-40 | bHLH family protein |