PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1116090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 579aa MW: 65023.1 Da PI: 9.561

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1116090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.5	9.5e-11	273	312	8	48
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Ed+ l++av+++G+++W++ ar +g +Rtl +c+srw ++l Pd.00g1116090.m01 273 EDKDLIQAVERYGTHRWEAGARFLG-TRTLRECQSRWVNWL 312 99*********************.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MSRLGGTLLQ ITAQRRQIRC AEAQRHISHI NLIIPEINNC ILTHIYREGN RAADKFSQMG 60 HLYGKPRVWQ HIPPNQVLSI MHEDAEGLFL VAQHISKGQD QQPAALSAKL DTRKRNLIEY 120 ALFFLGTLML MVVDLAMSGS GAIAPYIGIC ACVGAFGFAH AHVQGGMSFA GLAVSGALTS 180 GMRLMTKAAF EKYHNGLLMF LAISTLIEFL CILLYAIYFP RLPIVNYYRS KAASEGSKTV 240 SVDLAAGIQT QADIEVSLDC SKSYPDDLGL FGEDKDLIQA VERYGTHRWE AGARFLGTRT 300 LRECQSRWVN WLDPQIRRDE WSQTEDTKLR ELSTILPAQW QTISEMFNGS RTTMACQLRH 360 SFLLENPQEG SSSFTKKAGP PQTFHVLYHT DNNVLLGAPT VSGKTISAEL AMLRLFNTQP 420 DMKVIYIAPL KAIVRERMND WKRRLVSQLG KKMVEMTGDY TPDLMAILSA DIIISTPGKW 480 DGISRNWHSR AYVKKRIYGK HTTNSQPESG EKKVFLQRST PMSKIDLGFD NSFSNLNKHE 540 NVPAMKEKKA AMKENEKVAM KEKEKVVMKE NEKAAMKGE

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MSRLGGTLLQ ITAQRRQIRC AEAQRHISHI NLIIPEINNC ILTHIYREGN RAADKFSQMG  60
HLYGKPRVWQ HIPPNQVLSI MHEDAEGLFL VAQHISKGQD QQPAALSAKL DTRKRNLIEY  120
ALFFLGTLML MVVDLAMSGS GAIAPYIGIC ACVGAFGFAH AHVQGGMSFA GLAVSGALTS  180
GMRLMTKAAF EKYHNGLLMF LAISTLIEFL CILLYAIYFP RLPIVNYYRS KAASEGSKTV  240
SVDLAAGIQT QADIEVSLDC SKSYPDDLGL FGEDKDLIQA VERYGTHRWE AGARFLGTRT  300
LRECQSRWVN WLDPQIRRDE WSQTEDTKLR ELSTILPAQW QTISEMFNGS RTTMACQLRH  360
SFLLENPQEG SSSFTKKAGP PQTFHVLYHT DNNVLLGAPT VSGKTISAEL AMLRLFNTQP  420
DMKVIYIAPL KAIVRERMND WKRRLVSQLG KKMVEMTGDY TPDLMAILSA DIIISTPGKW  480
DGISRNWHSR AYVKKRIYGK HTTNSQPESG EKKVFLQRST PMSKIDLGFD NSFSNLNKHE  540
NVPAMKEKKA AMKENEKVAM KEKEKVVMKE NEKAAMKGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	3e-16	MYB family protein