PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1115590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 717aa MW: 80250 Da PI: 9.0887

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1115590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	40	8.2e-13	511	539	32	60
zf-Dof 32 fCkaCrryWtkGGalrnvPvGggrrknkk 60 +aC+r+WtkGG+lrnvPvGggr++++ Pd.00g1115590.m01 511 CPRACKRHWTKGGTLRNVPVGGGRKNKRL 539 4489******************9776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 717 aa Download sequence
MTAEVLSQPN GVVANGDLNP VSNNVTAAKN SKESERRRRR RKQKKNNKAS QAPEASAGDE 60 SDDGDAKESK VPQQIVEKVE IEYVPEKAAL NDGMDEEFRK IFEKFTFQDS AGAEEDKKDE 120 SQDGALQKKA DSDADEDEQD NQQKERGGVS NKKKKLQRRM KIAELKQISD PKLLVFLKSY 180 RNTVPVPRHW CQKRKFLQGK RGIEKQPFQL PDFIAATGIE KIRQAYIEKE DSKKLKQKQR 240 ERMQPKMGKM DIDYQVLHDA FFKYQTKPKL TTLGDLYHEG KEFEVKLREM KPGMLSHELK 300 EALGMPDGAP PPWLINMQRY GPPPSYPHLK IPGLNAPIPP GASFGYHAGG WGKPPVDEYG 360 QPLYGDVFGV QQQDQPNYEE EPVDKTKHWD SLSSTPTGVE TPDVIDLRKQ QRKEPERPLY 420 QVLEEKEEKI APGTLLGTTH TYVVGSGTQD KAGAKRVLRV FRVMGLSTKQ VSSDGLDWSQ 480 ASLLQGQTFQ LPKSPSAMRR QQQQQPEPLK CPRACKRHWT KGGTLRNVPV GGGRKNKRLK 540 KSSNSTSASA AATTTTTNSA AIDQTDHQEQ KPMSQVFYQA LPQQNLDNTI IFSSSSSPGL 600 SASTLPFLHQ SRNLSFPFSS SISTTSSSFD TNLSSISTSL QSSNVYNYAA AAAEDQFKAM 660 EEPTITSIMP NISQPNWKVP TSSNAMDVYS NDWNWEDIET LVSTDLNLPW DGSDIKP

Sequence ? help Back to Top

Protein Sequence Length: 717 aa Download sequence

MTAEVLSQPN GVVANGDLNP VSNNVTAAKN SKESERRRRR RKQKKNNKAS QAPEASAGDE  60
SDDGDAKESK VPQQIVEKVE IEYVPEKAAL NDGMDEEFRK IFEKFTFQDS AGAEEDKKDE  120
SQDGALQKKA DSDADEDEQD NQQKERGGVS NKKKKLQRRM KIAELKQISD PKLLVFLKSY  180
RNTVPVPRHW CQKRKFLQGK RGIEKQPFQL PDFIAATGIE KIRQAYIEKE DSKKLKQKQR  240
ERMQPKMGKM DIDYQVLHDA FFKYQTKPKL TTLGDLYHEG KEFEVKLREM KPGMLSHELK  300
EALGMPDGAP PPWLINMQRY GPPPSYPHLK IPGLNAPIPP GASFGYHAGG WGKPPVDEYG  360
QPLYGDVFGV QQQDQPNYEE EPVDKTKHWD SLSSTPTGVE TPDVIDLRKQ QRKEPERPLY  420
QVLEEKEEKI APGTLLGTTH TYVVGSGTQD KAGAKRVLRV FRVMGLSTKQ VSSDGLDWSQ  480
ASLLQGQTFQ LPKSPSAMRR QQQQQPEPLK CPRACKRHWT KGGTLRNVPV GGGRKNKRLK  540
KSSNSTSASA AATTTTTNSA AIDQTDHQEQ KPMSQVFYQA LPQQNLDNTI IFSSSSSPGL  600
SASTLPFLHQ SRNLSFPFSS SISTTSSSFD TNLSSISTSL QSSNVYNYAA AAAEDQFKAM  660
EEPTITSIMP NISQPNWKVP TSSNAMDVYS NDWNWEDIET LVSTDLNLPW DGSDIKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	41	RRRRRR
2	36	42	RRRRRRK
3	36	43	RRRRRRKQ
4	37	45	RRRRRKQKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-06	Dof family protein