PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1115320.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 194aa MW: 22008.1 Da PI: 8.4747 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 105.7 | 3.7e-33 | 19 | 116 | 2 | 102 |
HHHHHHHHHC......TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXX CS HSF_DNA-bind 2 Flkklyeile......deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFk 87 Fl+k+y++le ++ k+++sw+++g+ f+v+ + ef++ +LpkyFkh+nf+SF+RQLn+YgFkk++ ++ weFkh++F+ Pd.00g1115320.m01 19 FLSKTYDLLEegaaeeGDSGKKIVSWNAEGSGFIVWSPAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPKQ---------WEFKHEKFQ 101 9*********66555444899*************************************************9988.........********* PP XXXXXXXXXXXXXXX CS HSF_DNA-bind 88 kgkkellekikrkks 102 kg +++l +i rkk Pd.00g1115320.m01 102 KGCRHMLVEITRKKC 116 ************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MAATTSSGQS PRTRSPAPFL SKTYDLLEEG AAEEGDSGKK IVSWNAEGSG FIVWSPAEFS 60 ELLLPKYFKH NNFSSFIRQL NTYGFKKTSP KQWEFKHEKF QKGCRHMLVE ITRKKCEPSA 120 FPVYLKASEE SGSGNTAVAA AEENNCLLLM EENKNLRKQK LELQMQISQF KALEMKLLDC 180 LAQNMEDHQN KARC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 1e-39 | HSF family protein |