PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1114930.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 81aa MW: 9017.14 Da PI: 8.3759 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 71.6 | 1.4e-22 | 36 | 81 | 2 | 47 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47 Cq+++C+adls+ak+y+rrhkvC vh+kap+v v g++qrfCqqCs Pd.00g1114930.m01 36 CQADDCNADLSDAKQYYRRHKVCGVHAKAPAVRVGGVQQRFCQQCS 81 *********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence |
MNETKTKIKF WDEPSQIECQ SSSSLVYGGS MARPSCQADD CNADLSDAKQ YYRRHKVCGV 60 HAKAPAVRVG GVQQRFCQQC S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 2e-20 | SBP family protein |