PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1114550.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 177aa    MW: 19303.8 Da    PI: 10.5035
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1114550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2673.6e-211665255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Pd.00g1114550.m01 16 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 65
                       59******9.**********965...5*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MKQVGSSGSP PKPTKLYRGV RQRHWGKWVA EIRLPKNRTR LWLGTFDTAE EAALAYDKAA  60
YKLRGDFARL NFPHLRHNGS SVGGDFGEYK PLHSSVDAKL QAICEGLAET QKQGKTAGKP  120
SKRSSAARAP APPPEVKVET SSSPVMTDSD GSAGSSPLSD LTFADNTVFV MGKRQWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.18e-67ERF family protein