PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g111080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 144aa    MW: 15554.5 Da    PI: 8.495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g111080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.6e-1950100256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       +++ Vr ++ +gr++AeIrdp++   rkr++lg+++taeeAa+ +++a++kl+g+
  Pd.00g111080.m01  50 KISRVRKRP-WGRYAAEIRDPTQ---RKRVWLGTYDTAEEAAAVYDRAALKLRGP 100
                       6778*****.**********965...5**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MIHQNQNPPP NPTRLPPKQL VRIILADADA TDSSSDEDSV VPGVKRHVRK ISRVRKRPWG  60
RYAAEIRDPT QRKRVWLGTY DTAEEAAAVY DRAALKLRGP HAVTNFTIPV IAEETVADEV  120
VPAAGSSHLS DVGGEGGAAG CVSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-23ERF family protein