PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1110750.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 770aa MW: 86861.2 Da PI: 7.2084

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1110750.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.6e-08	666	714	2	47
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 ++WT+eE+++++d vk ++ W+ I + ++ ++++ +++s+++++ Pd.00g1110750.m01 666 LSWTAEEEKKFKDIVKSNPPSlgitFWDQIFKSFP-KKSRRELVSYYFNV 714 58***************88**********.9********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MKSVKVQKLS ETLGHDQLEL QQGGSRLNSP LPSRSPNKAP ITISFIDTTT HQRVISHQNQ 60 NAKTPTKKYK SSTGWSMVAD GSALDCAKTP KKNETDGFSV DLEPPSEAPE RCVLDVPHKL 120 RCWFDQLLGV FLKEISAQGL LRPLPPMIGN GQRVDLLKLF WVVRKRGGFD TISKIRVWDS 180 VAKECGLGWG LGWALKLVYV KYLHLLERVI ENKALEWSVD ISGLDLTEQF MDLEDKLTKV 240 FPEISNQKVK DGGYPHVELS PKNFKDSNEV GSEVAESDRL KKSVVSEAFL DLDSRRDAGK 300 FCNGDVPLSG GAMKCTVNLM NKNLDLTNSM EDVGKVCDNG EVSEVGESGR GKKYNDCDEA 360 VIILDPSPGE VSSFRKRKRG PSCGSEVGES CRGKKYNDIS NEDAVILDPS TDEEANSFWK 420 RKQESLCGML NWVRMIAKDP CDPAVGSLPE RSKWKSFGNE ENWMQVLWAR EAIFVKKHAD 480 SGAEQSNWQK NQRMHPSLYD DHFSSSYNLR ERLRLEKKLL SVGTMPQSRT GSESSSPSYS 540 PDMAGMEDQL LGTSDFTGVL DRYPPSHIPL GSNYQAHLPE WTGEASESEL KWLGSRFWPL 600 EKPEHRYLIE RDPIGKGRQE SCGCQVSGSI ECVRFHISEK RLRVKLELGP AFYHWEFNLM 660 GEEVGLSWTA EEEKKFKDIV KSNPPSLGIT FWDQIFKSFP KKSRRELVSY YFNVFLLHRR 720 GYQNRFTPNN IDSDDEGLES GSVTNGFGDE ERKPSKSILK SPHKPHAKCR

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MKSVKVQKLS ETLGHDQLEL QQGGSRLNSP LPSRSPNKAP ITISFIDTTT HQRVISHQNQ  60
NAKTPTKKYK SSTGWSMVAD GSALDCAKTP KKNETDGFSV DLEPPSEAPE RCVLDVPHKL  120
RCWFDQLLGV FLKEISAQGL LRPLPPMIGN GQRVDLLKLF WVVRKRGGFD TISKIRVWDS  180
VAKECGLGWG LGWALKLVYV KYLHLLERVI ENKALEWSVD ISGLDLTEQF MDLEDKLTKV  240
FPEISNQKVK DGGYPHVELS PKNFKDSNEV GSEVAESDRL KKSVVSEAFL DLDSRRDAGK  300
FCNGDVPLSG GAMKCTVNLM NKNLDLTNSM EDVGKVCDNG EVSEVGESGR GKKYNDCDEA  360
VIILDPSPGE VSSFRKRKRG PSCGSEVGES CRGKKYNDIS NEDAVILDPS TDEEANSFWK  420
RKQESLCGML NWVRMIAKDP CDPAVGSLPE RSKWKSFGNE ENWMQVLWAR EAIFVKKHAD  480
SGAEQSNWQK NQRMHPSLYD DHFSSSYNLR ERLRLEKKLL SVGTMPQSRT GSESSSPSYS  540
PDMAGMEDQL LGTSDFTGVL DRYPPSHIPL GSNYQAHLPE WTGEASESEL KWLGSRFWPL  600
EKPEHRYLIE RDPIGKGRQE SCGCQVSGSI ECVRFHISEK RLRVKLELGP AFYHWEFNLM  660
GEEVGLSWTA EEEKKFKDIV KSNPPSLGIT FWDQIFKSFP KKSRRELVSY YFNVFLLHRR  720
GYQNRFTPNN IDSDDEGLES GSVTNGFGDE ERKPSKSILK SPHKPHAKCR