PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1109920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 333aa MW: 36705.2 Da PI: 10.3877

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1109920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	106.8	3.4e-33	43	125	2	82
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssa 82 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el +++s +++++ +++s ++a Pd.00g1109920.m01 43 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELDELPSWNPHSVstTTASTAVTA 125 79**************************************************************5555533322111111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGDTHHHHHP QATTSSRLGI RPSSGLSADI VEVVRGSHIV RSTGRKDRHS KVCTAKGPRD 60 RRVRLAAHTA IQFYDVQDRL GYDRPSKAVD WLIKKAKAAI DELDELPSWN PHSVSTTTAS 120 TAVTAMEAQN PTTTGFHCFE AVDAIGSANG RATMVGSGVS EQIVQNQNPL TNSTLLPPSL 180 DSDAIADTIK SFFPMGASAG AAEAPSSTIQ FQNYPPDLLS RTSSQSQDLR LSLHSFQDPI 240 LLQHQQAQAQ HHQAQTHQNE QTLFSGTQQQ NPLGRILRLP HPCTNSRRGG TRRHLRQAVL 300 CFLQFSPLKQ TKKKTELLFK GLRLISTFHR ETK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	3e-47	TCP family protein