PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g110680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 91aa    MW: 10802 Da    PI: 8.5401
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g110680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.58.2e-222579256
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +k +++t+eq+++LeelF+++ +p+ ++r++L+++lgL+ rq+k+WFqN+R++ k
  Pd.00g110680.m01 25 KKYHRHTSEQIQRLEELFKECAHPDDNQRQQLSRELGLEPRQIKFWFQNKRTQTK 79
                      78999**********************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MELPKGNAGV SGDEQEPSSS RRGNKKYHRH TSEQIQRLEE LFKECAHPDD NQRQQLSREL  60
GLEPRQIKFW FQNKRTQTKV LHFSHFDDMH A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.41e-28HD-ZIP family protein