PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1105720.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 322aa    MW: 35564.4 Da    PI: 5.0106
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1105720.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-1978126355
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+G+r+++ +g+W+AeIrdp++     r++lg+f t+eeAa+a+++ ++k++g
  Pd.00g1105720.m01  78 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTPEEAARAYDREARKIRG 126
                        9*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MCGGAILADL IPRNRGLRVT ASDIWPNSPF AKLDPDNFFD SNPSSLTRTD SSPRKRAQPT  60
SGNRQEEKPP KRARKNLYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTP EEAARAYDRE  120
ARKIRGKKAK VNFPNEDDDI PTQTYLRNPN SPPLFQTSSE NLSNSHMPKS FDLGFGYDLN  180
QIATISSNSN SKGLSSMNLV NTDTTVISGE ENSGSGSDGA YSSTVGLLGC NQNGSSCCYG  240
EAEVKEVEET KEGILNKDAI AMMEENEVQK LSEELMAYEN MMKFYQIPYL DGQSTATQHP  300
PAQEGGMVGD LWSFDDDGAS AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.17e-34ERF family protein