PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1102500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 635aa MW: 70210 Da PI: 4.6797

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1102500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.6	1.3e-35	153	244	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k+y++++d++++ ++sws+ +nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+l Pd.00g1102500.m01 153 FLNKTYDMVDDPSTNAVVSWSNGNNSFVVWNVPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHL 235 9**************************************************************999.........*********** PP XXXXXXXXX CS HSF_DNA-bind 94 lekikrkks 102 l+++ r+k Pd.00g1102500.m01 236 LKTVSRRKP 244 ****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MLKAAVDAVK LTAEFLVGKL ATGSPDIQKQ AAYELRLLAK TGMDNRRIIA EAGAIPFLVT 60 LLRSHEPRIQ ENAVTALLNL SIYNNNKILI MAAGAIDSIV NVLESGNTME ARENAAAAIF 120 SLSMIDDCKQ VNMEGVEDAA TMINLANTPP PPFLNKTYDM VDDPSTNAVV SWSNGNNSFV 180 VWNVPEFSRD LLPKYFKHNN FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQKHLLKTVS 240 RRKPAHAHSH QQAPPQVQSS QVGACVEVGN LELEEEVERL KNDKNSLMQE LVRLRQKQQA 300 TDNQLHNVGQ RVQGMEQRQQ QMMSFLAKAM HSPGFLSQLV QHQNENNRRI TGSNKKRRLP 360 RQEDEILVGK LSTKSLDGQM VKYQPSMNEA AKAMLRQILK MNTSPRLEPS INPDAFLIDN 420 VPSSDALESG DTSNRILGVT FSEVPPTSAE CYMPEEESGF PNSCHSTAIS EIQCSPYAVT 480 NGVKAAQVLE ENMHNFQEDA VMPESTQMQG GVPESTVEIP NANFMSSETG NAEYMDMSAV 540 LDGTLPTETD AFSPEPDVDA LLGSSLPGIT DIFWEQFLPA SPLTGDVDEI NLSSTDGGTT 600 DQELKLTEEN GWDKTQHMNH ITEQMELLAP GSRIG

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MLKAAVDAVK LTAEFLVGKL ATGSPDIQKQ AAYELRLLAK TGMDNRRIIA EAGAIPFLVT  60
LLRSHEPRIQ ENAVTALLNL SIYNNNKILI MAAGAIDSIV NVLESGNTME ARENAAAAIF  120
SLSMIDDCKQ VNMEGVEDAA TMINLANTPP PPFLNKTYDM VDDPSTNAVV SWSNGNNSFV  180
VWNVPEFSRD LLPKYFKHNN FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQKHLLKTVS  240
RRKPAHAHSH QQAPPQVQSS QVGACVEVGN LELEEEVERL KNDKNSLMQE LVRLRQKQQA  300
TDNQLHNVGQ RVQGMEQRQQ QMMSFLAKAM HSPGFLSQLV QHQNENNRRI TGSNKKRRLP  360
RQEDEILVGK LSTKSLDGQM VKYQPSMNEA AKAMLRQILK MNTSPRLEPS INPDAFLIDN  420
VPSSDALESG DTSNRILGVT FSEVPPTSAE CYMPEEESGF PNSCHSTAIS EIQCSPYAVT  480
NGVKAAQVLE ENMHNFQEDA VMPESTQMQG GVPESTVEIP NANFMSSETG NAEYMDMSAV  540
LDGTLPTETD AFSPEPDVDA LLGSSLPGIT DIFWEQFLPA SPLTGDVDEI NLSSTDGGTT  600
DQELKLTEEN GWDKTQHMNH ITEQMELLAP GSRIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-125	HSF family protein