PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1101410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 322aa    MW: 36267.8 Da    PI: 4.2592
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1101410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.25e-152671148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       rg++T eE++ ++++++ +G++ W++Ia+ ++ gRt++++k+ w+++l
  Pd.00g1101410.m01 26 RGNFTREEEDSIIRLHEAWGNK-WSKIASQFP-GRTDNEIKNVWNTHL 71
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MINCLLRCGK SCRLRWINYL RPDLKRGNFT REEEDSIIRL HEAWGNKWSK IASQFPGRTD  60
NEIKNVWNTH LKKKLGFKNS EFCGDESKEL SSITSSSSSS SSSASILSGG KPSVAGELEH  120
QSADQETSMA NNNPHHDPCI LTIPEELDLD SPMELINEFR PDPKDLKELT SSSVSSNESN  180
GSSSSQLDIS IPSEEQMDFL FDFSDPNYDI PLEPDSDFWN MFDGFVPFQS NEVQLNQAEA  240
CKSSNYGQHE NEKWLSYLES ELGLDQPTAD STGHEFLAQV TTGQLLPETF QCDKMPNPAA  300
EFDQSLDYFQ MWPSLPHNNS SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12820.13e-40MYB family protein