PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1101160.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 312aa    MW: 35296.1 Da    PI: 4.7123
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1101160.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.49.5e-07192236655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++ r RR++i ++ +eL +l+P        K++ ae+L+ A +++k+L+
  Pd.00g1101160.m01 192 SIAARERRRKITEKTQELGKLVPGG-----SKMNTAEMLTAAYNFVKYLR 236
                        67889******************95.....5*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MALSSFSSRE TVPPQSFGSE MTNCFQPNIE AELLAAEELL KYYQLDYNCS ILPNNLFLDD  60
HPCPDPYNLL NLENYHPDTT SDDHLLLPHL TTSDMFPQLD FYPYPYPKRQ KCFQDFVYPE  120
FTPATFYDAF APDSCPLPEL LPAPGVFATP LLTFNQHPEE TVTDSNKLKV NDYEIGFTAK  180
KKVEEKCVSA QSIAARERRR KITEKTQELG KLVPGGSKMN TAEMLTAAYN FVKYLRAQVG  240
ILEFMGSFQE LKGAPPADEL RAVAFPIIQE KLYLENNCLV PEKFVEILAK HFDAQSKPSL  300
SNNLHQLLTS SG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180201KKKVEEKCVSAQSIAARERRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.14e-26bHLH family protein