PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1099000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 199aa MW: 22653 Da PI: 5.2102 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.7 | 5.6e-05 | 38 | 77 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +ErrRR+++ +++ +Lr l+ Ka+i+e A+ YI++Lq Pd.00g1099000.m01 38 NLHAERRRRQKLSERLLTLRALMN-----------KATIVEDAITYIHELQ 77 5579****************9975...........559***********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MEFVASALDE LCITEQGKRG GRMGHRSHNN DDEYKSKNLH AERRRRQKLS ERLLTLRALM 60 NKATIVEDAI TYIHELQKTV NILKDQLFDM EASEEEALEP KKEEIQAQEE MKKFGIQAGV 120 NVTQIDGNKL WLKAILEKKR GGFTKLMEAM TAFGFELTDT SVTTSNGAML VSSCVMGFYC 180 ETLEVEQTKE LMLEIINSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21330.1 | 2e-40 | bHLH family protein |