PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1098970.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 290aa    MW: 31144.4 Da    PI: 6.5672
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1098970.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000281992193454
                        TTS-STCHHHHHHHHHHHHHH CS
                HLH  34 pskKlsKaeiLekAveYIksL 54 
                        p  K + a++L +A+eYIk L
  Pd.00g1098970.m01 199 PTFKTDTASVLHEAIEYIKFL 219
                        666999*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MAEEFQAGIC GSSWWNSSRH ALVASPCSVG FNDHMGSFGC PNDMVDIKAS RSSCGFDHSS  60
SSSSTPSDLN QALLLSRSGG GRAESNFHNS MLQEGVGVDE DSSSLIDGFK PMTATALNHG  120
NGIRSSNGLF SSSQSQFTAP ASSALVHEHK PNSHNFTTKG NTNEDVQDSN SVVKKSGSSM  180
SSCEPVFKRA RIETPSPLPT FKTDTASVLH EAIEYIKFLH EQVSVLSTPY MKNGAPMQHQ  240
QGSDHKMKEA EGAKHDLKSR GLCLVPISST FPVANETTDF WTPTFGATFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.45e-41bHLH family protein