PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1098500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 844aa MW: 92417.7 Da PI: 6.4533

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1098500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.8	9.4e-19	333	432	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + Pd.00g1098500.m01 333 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDSKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRLE-P 422 89************************555566778***********99899999999.*******************766.7 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 e++lv+++++ Pd.00g1098500.m01 423 EGKLVMGFRK 432 7777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 844 aa Download sequence
MSSSSSKVCY NSECKELKSE HPRKGWRLRT GEYAELCDRC YLAYEEGRFC ETFHMNAAGW 60 RCCESCGKRV HCGCIVSSHA FTLLDPGGVD CMTCARKNFV LTPNPAWPTS MFFHSPLSER 120 LKDLSVKNWT HLAGSGPVPW RQAPSLFNSS IPSSELHTRV PYEVDVSTGI NKLNASERIF 180 VSSMEKKKVE DFSERLMKVN LTMSTQESLE NGKPGNNREE QSSSCLNISQ QSASLKEDPS 240 TPQFGPYGSV SETNAQVGVT GTNLRPTLPL AKQFNGNLQN GVESSADTQI RNARPRADAR 300 GRNQLLPRYW PRFTDQELQQ ISGDKNSVIT PLFEKMLSAS DAGRIGRLVL PKKCAEAYFP 360 PISQPEGLPL KVQDSKGKEW VFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ AGDIVTFSRL 420 EPEGKLVMGF RKASTAPPSD QENETNKASN GVSALADAEL ADPSSWSKVD KSGYIAKEAL 480 GSKSLISRKR KNSTLGSKSK RLRIENEDLI ELKLTWEEAQ GLLRAPANHI PTVVVIEGFE 540 FEEYEDAPIL GMPTIYATGT AGEKIQWAQC EDCFKWRKLP MNALLPSKWT CSDNSWDPER 600 SSCSAAQDLT AEQLEDLLPS HSTVTSKKMK AAKQDPDNIE ALEGLDTLAN LAILGEGESL 660 PASAQATTKH PRHRPGCSCI VCIQPPSGKG PKHKQTCTLI DKLDDDTPTC CNAGSSSPNQ 720 KKEVLELSDD DLNRTKSSTP PFKGQIDLNI QPEREEELSP GSDSGSMMKL LQDATERYLK 780 QQRLSSSGGS ENSSGNRSQQ VGGEASGGEP LSNGVTLGSS NHDGGNDCPA TLSIKASASM 840 TATG

Sequence ? help Back to Top

Protein Sequence Length: 844 aa Download sequence

MSSSSSKVCY NSECKELKSE HPRKGWRLRT GEYAELCDRC YLAYEEGRFC ETFHMNAAGW  60
RCCESCGKRV HCGCIVSSHA FTLLDPGGVD CMTCARKNFV LTPNPAWPTS MFFHSPLSER  120
LKDLSVKNWT HLAGSGPVPW RQAPSLFNSS IPSSELHTRV PYEVDVSTGI NKLNASERIF  180
VSSMEKKKVE DFSERLMKVN LTMSTQESLE NGKPGNNREE QSSSCLNISQ QSASLKEDPS  240
TPQFGPYGSV SETNAQVGVT GTNLRPTLPL AKQFNGNLQN GVESSADTQI RNARPRADAR  300
GRNQLLPRYW PRFTDQELQQ ISGDKNSVIT PLFEKMLSAS DAGRIGRLVL PKKCAEAYFP  360
PISQPEGLPL KVQDSKGKEW VFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ AGDIVTFSRL  420
EPEGKLVMGF RKASTAPPSD QENETNKASN GVSALADAEL ADPSSWSKVD KSGYIAKEAL  480
GSKSLISRKR KNSTLGSKSK RLRIENEDLI ELKLTWEEAQ GLLRAPANHI PTVVVIEGFE  540
FEEYEDAPIL GMPTIYATGT AGEKIQWAQC EDCFKWRKLP MNALLPSKWT CSDNSWDPER  600
SSCSAAQDLT AEQLEDLLPS HSTVTSKKMK AAKQDPDNIE ALEGLDTLAN LAILGEGESL  660
PASAQATTKH PRHRPGCSCI VCIQPPSGKG PKHKQTCTLI DKLDDDTPTC CNAGSSSPNQ  720
KKEVLELSDD DLNRTKSSTP PFKGQIDLNI QPEREEELSP GSDSGSMMKL LQDATERYLK  780
QQRLSSSGGS ENSSGNRSQQ VGGEASGGEP LSNGVTLGSS NHDGGNDCPA TLSIKASASM  840
TATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-152	B3 family protein