PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1097830.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 771aa MW: 86583.1 Da PI: 7.1176

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1097830.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	39.9	9e-13	565	593	32	60
zf-Dof 32 fCkaCrryWtkGGalrnvPvGggrrknkk 60 +aC+r+WtkGG+lrnvPvGggr++++ Pd.00g1097830.m02 565 CPRACKRHWTKGGTLRNVPVGGGRKNKRL 593 4489******************9776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MTAEVLSQPN GVVANGDLNP VSNNVTAAKN SKESERRRRR RKQKKNNKAS QAPEASAGDE 60 SDDGDAKESK VPQQIVEKVE IEYVPEKAAL NDGMDEEFRK IFEKFTFQDS AGAEEDKKDE 120 SQDGAPQKKA DSDADEDEQD NQQKERGGVS NKKKKLQRRM KIAELKQISD PKLLVFLKSY 180 RNTVPVPRHW CQKRKFLQGK RGIEKQPFQL PDFIAATGIE KIRQAYIEKE DSKKLKQKQR 240 ERMQPKMGKM DIDYQVLHDA FFKYQTKPKL TTLGDLYHEG KEFEVKLREM KPGMLSHELK 300 EALGMPDGAP PPWLINMQRY GPPPSYPHLK IPGLNAPIPP GASFGYHAGG WGKPPVDEYG 360 QPLYGDVFGV QQQDQPNYEE EPVDKTKHWD SLSSTPTGVE TPDVIDLRKQ QRKEPERPLY 420 QVLEEKEEKI APGTLLGTTH TYVVGSGTQD KAGAKRVDLL RGQKADKVDV TLQPEELELM 480 ENVLPAKYEE AREEEKLRSQ REDFSDMVAE VLRVFRVMGL STKQVSSDGL DWSQASLLQG 540 QTFQLPKSPS AMRRQQQQQP EPLKCPRACK RHWTKGGTLR NVPVGGGRKN KRLKKSSNST 600 SASAAATTTT TNSAAIDQTD HQEQKPMCQV FYQALPQQNL DNTIIFSSSS SPGLSASTLP 660 FLHQSRNLSF PFSSSISTTS SSFDTNLSSI STSLQSSNVY NYATAAAEDQ FKAMEEPTIT 720 SIMPNISQPN WKVPTSSNAM DVYSNDWNWE DIETLVSTDL NLPWDGSDIK P

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MTAEVLSQPN GVVANGDLNP VSNNVTAAKN SKESERRRRR RKQKKNNKAS QAPEASAGDE  60
SDDGDAKESK VPQQIVEKVE IEYVPEKAAL NDGMDEEFRK IFEKFTFQDS AGAEEDKKDE  120
SQDGAPQKKA DSDADEDEQD NQQKERGGVS NKKKKLQRRM KIAELKQISD PKLLVFLKSY  180
RNTVPVPRHW CQKRKFLQGK RGIEKQPFQL PDFIAATGIE KIRQAYIEKE DSKKLKQKQR  240
ERMQPKMGKM DIDYQVLHDA FFKYQTKPKL TTLGDLYHEG KEFEVKLREM KPGMLSHELK  300
EALGMPDGAP PPWLINMQRY GPPPSYPHLK IPGLNAPIPP GASFGYHAGG WGKPPVDEYG  360
QPLYGDVFGV QQQDQPNYEE EPVDKTKHWD SLSSTPTGVE TPDVIDLRKQ QRKEPERPLY  420
QVLEEKEEKI APGTLLGTTH TYVVGSGTQD KAGAKRVDLL RGQKADKVDV TLQPEELELM  480
ENVLPAKYEE AREEEKLRSQ REDFSDMVAE VLRVFRVMGL STKQVSSDGL DWSQASLLQG  540
QTFQLPKSPS AMRRQQQQQP EPLKCPRACK RHWTKGGTLR NVPVGGGRKN KRLKKSSNST  600
SASAAATTTT TNSAAIDQTD HQEQKPMCQV FYQALPQQNL DNTIIFSSSS SPGLSASTLP  660
FLHQSRNLSF PFSSSISTTS SSFDTNLSSI STSLQSSNVY NYATAAAEDQ FKAMEEPTIT  720
SIMPNISQPN WKVPTSSNAM DVYSNDWNWE DIETLVSTDL NLPWDGSDIK P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	41	RRRRRR
2	36	42	RRRRRRK
3	36	43	RRRRRRKQ
4	37	45	RRRRRKQKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-06	Dof family protein