PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1096950.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 270aa    MW: 29758.9 Da    PI: 4.8669
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1096950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.4e-184391355
                AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       + GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Pd.00g1096950.m01 43 FVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 91
                       78******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEFQFQEQNQ ICFPAAANKA VGIPMSKVGK SKGRTRSNNT NNFVGVRQRP SGRWVAEIKD  60
TTQKIRMWLG TFETAEEAAR AYDEAACLLR GSNTRTNFIT HVSLDSPLAS RIRNLLSTKK  120
GGSSKQVIEQ TSPSIADHDD MNASHPPTSS TTSSDKYMTN NISTASTSTC NSTSSGSDTL  180
SSEVFEDSQL FDDVYRPDLR HCNEEFELSS SASQSNLSWG GFEPGVDGMK VERQISASLY  240
AMNGVQEYMD TVYDPNEPSW DLPPLCPLFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-29ERF family protein