PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1095550.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Dof | ||||||||
Protein Properties | Length: 461aa MW: 49994.1 Da PI: 7.0994 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.4 | 3.2e-38 | 112 | 171 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++r vPvG+grrknk+ Pd.00g1095550.m01 112 PDKVLPCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRSVPVGAGRRKNKHL 171 78999*****************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence |
MSETESRSNK NSNDIKLFGR TIPLLQTQIE AITGKNSQVP PKSQFMDSSS ELTKAEADGP 60 CAENSVQMGT SVICKEKEKS QMQVNEARVN AKTNSKQAEN RILNQEKDFQ KPDKVLPCPR 120 CNSLDTKFCY FNNYNVNQPR HFCKNCQRYW TAGGTMRSVP VGAGRRKNKH LASQYHQIIV 180 SFDEVPSTRL ETTDSINHQL LACGESSSTF GLPDRAGTVL KFGHEAPLCE SMDTVVDLRD 240 PGTCVEISSV SGRESGDEPS CVSSVTACGN QGSELPKNIL QRDGIGLQGS CSEPSISHPL 300 NYYPVAPLVF PWSPGWRNAA SPAAPQHSQS ICVQNCTAPN QVQWYPTPVL VVPGPCPQSI 360 PLQTVPAPYW GCVPVCPAGM GNVSLSGSNS CFSPSSSTSN SCCSGNGSPT LGKHSRDSNI 420 MDEEKSENRV LVPKPLRVDD PDEASKSPIW ASLGIKHDLK T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39660.1 | 2e-54 | Dof family protein |