PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g109410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 481aa MW: 52047.8 Da PI: 8.3917

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g109410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.7e-30	227	285	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+ Pd.00g109410.m01 227 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAiGCPVRKQVQRLAEDKTILITTYEGNHSHP 285 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MMMRSPVVNP NKTATIILRL LTDIHQNSNN KLMTSLQVEL ERLHEENGEL KTMLDQMTKS 60 YSQLQAQLLI AMQKQAQNRL REPIKCEANG MLARQFMDPR PSAAAAIDHV RDPSVAYSSG 120 KTPADHEAFS SFAPSNLNIE VMSKERDQYQ RRLQTNINCA EEALDRSSQC LGSPNYTSKS 180 GDPNLFDDAN DEPKRSTDQE QVPVADQIPF RKARVSVRAR SEAPMISDGC QWRKYGQKMA 240 KGNPCPRAYY RCTMAIGCPV RKQVQRLAED KTILITTYEG NHSHPLPPAA TAMANTTSAA 300 AAMLLSASAP FPTITLDLTQ SPMQQFHRIP PPSSSTFPLP LHGYHQLMGG PGHPIPGPTY 360 FPPNYKAPPP PPGVSLGGQR STSTHASGMI ETVSAAIASD PNFTAALAEA ISTIMGAPRP 420 HQGHQGGINI NDGEIANNNA ARGLVASTNN SPPSANIGLP PGSLQPGSPQ LPQSCTTFST 480 N

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MMMRSPVVNP NKTATIILRL LTDIHQNSNN KLMTSLQVEL ERLHEENGEL KTMLDQMTKS  60
YSQLQAQLLI AMQKQAQNRL REPIKCEANG MLARQFMDPR PSAAAAIDHV RDPSVAYSSG  120
KTPADHEAFS SFAPSNLNIE VMSKERDQYQ RRLQTNINCA EEALDRSSQC LGSPNYTSKS  180
GDPNLFDDAN DEPKRSTDQE QVPVADQIPF RKARVSVRAR SEAPMISDGC QWRKYGQKMA  240
KGNPCPRAYY RCTMAIGCPV RKQVQRLAED KTILITTYEG NHSHPLPPAA TAMANTTSAA  300
AAMLLSASAP FPTITLDLTQ SPMQQFHRIP PPSSSTFPLP LHGYHQLMGG PGHPIPGPTY  360
FPPNYKAPPP PPGVSLGGQR STSTHASGMI ETVSAAIASD PNFTAALAEA ISTIMGAPRP  420
HQGHQGGINI NDGEIANNNA ARGLVASTNN SPPSANIGLP PGSLQPGSPQ LPQSCTTFST  480
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	1e-55	WRKY family protein