PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1093960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 1034aa MW: 114917 Da PI: 7.3995 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 126.1 | 1.4e-39 | 147 | 224 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C++dls+ak+yhrrhkvC++hska+++ v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g1093960.m01 147 VCQVEDCKVDLSHAKDYHRRHKVCDMHSKATKARVGNVLQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 224 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1034 aa Download sequence |
MEAFGGSARN FYGPMVSDLK AVGKKSLEWD LNDCKWDGDL FTASPLNSIP SDFRSRQLFP 60 VQPETPSNAG LSNSSSSGSD DISPGNEKGK RELEKRRRAT FVENEELNNE AGSLNLKLGE 120 QAYPIMEGEV QTGKKTKIVG TTLNRAVCQV EDCKVDLSHA KDYHRRHKVC DMHSKATKAR 180 VGNVLQRFCQ QCSRFHVLQE FDEGKRSCRR RLAGHNRRRR KTHPDPVVNG GSLNDERGSS 240 YLLISLLRIL SNMQSNSSDQ TKDQDLLSHL LRSLANLAGT VDGRSISALL PGSQGLLNSG 300 PSVQTAQKVP DMVSNGCEPS RPSVSASKRD DCVNLEDPLR PIRQCPTVPA SDLLQKRISS 360 VDADHRSLQV VSGIQAAKPL PSRDSVPSKS VAPDATMGRM QLNGIDLNNT YDDSQDYLGN 420 LGSSHSPVNP GTVSLGFPLW MQQESQKSSP PQTSGTSDST STQSPSTSSG EGQSRTDRIV 480 FKLFGKDPND LPFVLRSQIL DWLSHSPSDI ESYIRPGCII LTIYLRLEKS TWEELCCHLG 540 SNLKRLLHAA NDPFWTTGWV YTRVQQNVAF TYNGQVVLDT PLPLKSHKNC RISYIKPIAV 600 SLSERAQFVV KGFNLSRSTT RLLCALEGKY LAQETCYDLM DSADTTVEHD EQHCLRFSCS 660 IPNVTGRGFI EVEDHGLSSS FFPFIVAEQE VCSEICMLEG VIEVAETADD IQREPEKLEA 720 KNLAMDFIHE LGWLLHRSHT KFRLGHMDPN LDLFPFRRFR LLMEFSMDHD WCAVVKKLLG 780 ILFEGNVDAG EHPSIELGLL DMSLLHRAVR RKCRSMVELL LRFVPDKGLD KTGSEQKQQV 840 DRDGNNFLFK PDAVGPMGLT PLHVAASTDG CEIILDALTD DPGKVGIEAW KYARDSTGLT 900 PNDYACLRGR YSYLHIVQRK ISKKLESGQV VLDIPGTILD SNSKQKQSDG HKSSKVASLE 960 TEKIEIKAMQ GHCKLCEMKL AYGNTRSLVY RPAMLSMVAI AAVCVCVALL FKSSPEVVYV 1020 FQPFRWELLK YGPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 0.0 | SBP family protein |