PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1093930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 1062aa MW: 118005 Da PI: 6.9922

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1093930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.7	9.4e-40	175	252	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++ v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g1093930.m01 175 VCQVEDCKADLSHAKDYHRRHKVCDMHSKATKARVGNVLQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 252 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1062 aa Download sequence
MFLRLFRSEV GNFACDGIEG CEYGDVVEDV EGLSGARNFY GPMVSDLKAV GKKSLEWDLN 60 DCKWDGDLFT ASPLNSIPSD FRSRQLFPVQ PETPSNAGLS NSSSSGSDDI SPGNEKGKRE 120 LEKRRRATFV ENEELNNEAG SLNLKLGEQA YPIMEGEVQT GKKTKIVGTT LNRAVCQVED 180 CKADLSHAKD YHRRHKVCDM HSKATKARVG NVLQRFCQQC SRFHVLQEFD EGKRSCRRRL 240 AGHNRRRRKT HPDPVVNGGS LNDERGSSYL LISLLRILSN MQSNSSDQTK DQDLLSHLLR 300 SLANLAGTVD GRSISALLPG SQGLLNSGPS VQTAQKVPDM VSNGCEPSRP SVSASKRDDC 360 VNLEDPLRPI RQCPTVPASD LLQKRISSVD ADHRSLQVVS GIQAAKPLPS RDSVPSKSVA 420 PDATMGRMQL NGIDLNNTYD DSQDYLGNLG SSHSPVNPGT VSLGFPLWMQ QESQKSSPPQ 480 TSGTSDSTST QSPSTSSGEG QSRTDRIVFK LFGKDPNDLP FVLRSQILDW LSHSPSDIES 540 YIRPGCIILT IYLRLEKSTW EELCCHLGSN LKRLLHAAND PFWTTGWVYT RVQQNVAFTY 600 NGQVVLDTPL PLKSHKNCRI SYIKPIAVSL SERAQFVVKG FNLSRSTTRL LCALEGKYLA 660 QETCYDLMDS ADTTVEHDEQ HCLRFSCSIP NVTGRGFIEV EDHGLSSSFF PFIVAEQEVC 720 SEICMLEGVI EVAETADDIQ REPEKLEAKN LAMDFIHELG WLLHRSHTKF RLGHMDPNLD 780 LFPFRRFRLL MEFSMDHDWC AVVKKLLGIL FEGNVDAGEH PSIELGLLDM SLLHRAVRRK 840 CRSMVELLLR FVPDKGLDKT GSEQKQQVDR DGNNFLFKPD AVGPMGLTPL HVAASTDGCE 900 IILDALTDDP GKVGIEAWKY ARDSTGLTPN DYACLRGRYS YLHIVQRKIS KKLESGQVVL 960 DIPGTILDSN SKQKQSDGHK SSKVASLETE KIEIKAMQGH CKLCEMKLAY GNTRSLVYRP 1020 AMLSMVAIAA VCVCVALLFK SSPEVVYVFQ PFRWELLKYG PS

Sequence ? help Back to Top

Protein Sequence Length: 1062 aa Download sequence

MFLRLFRSEV GNFACDGIEG CEYGDVVEDV EGLSGARNFY GPMVSDLKAV GKKSLEWDLN  60
DCKWDGDLFT ASPLNSIPSD FRSRQLFPVQ PETPSNAGLS NSSSSGSDDI SPGNEKGKRE  120
LEKRRRATFV ENEELNNEAG SLNLKLGEQA YPIMEGEVQT GKKTKIVGTT LNRAVCQVED  180
CKADLSHAKD YHRRHKVCDM HSKATKARVG NVLQRFCQQC SRFHVLQEFD EGKRSCRRRL  240
AGHNRRRRKT HPDPVVNGGS LNDERGSSYL LISLLRILSN MQSNSSDQTK DQDLLSHLLR  300
SLANLAGTVD GRSISALLPG SQGLLNSGPS VQTAQKVPDM VSNGCEPSRP SVSASKRDDC  360
VNLEDPLRPI RQCPTVPASD LLQKRISSVD ADHRSLQVVS GIQAAKPLPS RDSVPSKSVA  420
PDATMGRMQL NGIDLNNTYD DSQDYLGNLG SSHSPVNPGT VSLGFPLWMQ QESQKSSPPQ  480
TSGTSDSTST QSPSTSSGEG QSRTDRIVFK LFGKDPNDLP FVLRSQILDW LSHSPSDIES  540
YIRPGCIILT IYLRLEKSTW EELCCHLGSN LKRLLHAAND PFWTTGWVYT RVQQNVAFTY  600
NGQVVLDTPL PLKSHKNCRI SYIKPIAVSL SERAQFVVKG FNLSRSTTRL LCALEGKYLA  660
QETCYDLMDS ADTTVEHDEQ HCLRFSCSIP NVTGRGFIEV EDHGLSSSFF PFIVAEQEVC  720
SEICMLEGVI EVAETADDIQ REPEKLEAKN LAMDFIHELG WLLHRSHTKF RLGHMDPNLD  780
LFPFRRFRLL MEFSMDHDWC AVVKKLLGIL FEGNVDAGEH PSIELGLLDM SLLHRAVRRK  840
CRSMVELLLR FVPDKGLDKT GSEQKQQVDR DGNNFLFKPD AVGPMGLTPL HVAASTDGCE  900
IILDALTDDP GKVGIEAWKY ARDSTGLTPN DYACLRGRYS YLHIVQRKIS KKLESGQVVL  960
DIPGTILDSN SKQKQSDGHK SSKVASLETE KIEIKAMQGH CKLCEMKLAY GNTRSLVYRP  1020
AMLSMVAIAA VCVCVALLFK SSPEVVYVFQ PFRWELLKYG PS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein