PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1092000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 19228.4 Da PI: 10.8292 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.2 | 6.5e-21 | 37 | 87 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr+++ +grWvAeI+d s +r r +lg+++t+eeAa+a+++a+++l+ge Pd.00g1092000.m01 37 RYVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 87 69*******.7*********43...36**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MAGPEVFTKT TAATSSPTNN KTMVTKSPST TKTALRRYVG VRQRPSGRWV AEIKDSSQRV 60 RLWLGTYDTP EEAARAYDEA ARALRGENAR TNFVSPGPAT NPNSSPLVSS VSNGGFMSGS 120 DGRHSGTGGL SFSSLKAKLS KNLQSIMARS SDHNKSSKSR VDASSLSEER FSVVMCFGEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-16 | ERF family protein |