PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1091510.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ARR-B | ||||||||
Protein Properties | Length: 718aa MW: 77773.9 Da PI: 6.5963 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 86.3 | 3e-27 | 232 | 285 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G +kA+Pk+ilelm+v+gL++e+v+SHLQk+Rl Pd.00g1091510.m01 232 KPRVVWSVELHQQFVSAVNQL-GLDKAVPKRILELMNVPGLSRENVASHLQKFRL 285 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39 | 1.9e-12 | 234 | 284 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g++++++ s++qk++ Pd.00g1091510.m01 234 RVVWSVELHQQFVSAVNQLGLDkaVPKRILELMNvPGLSRENVASHLQKFR 284 678**********************************************97 PP | |||||||
3 | Response_reg | 74.8 | 3.2e-25 | 48 | 156 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 vl+vdD+ + +++l+++l + y +v+++++++ al+ll+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a g + + + + Pd.00g1091510.m01 48 VLVVDDDTTCLRILEVLLGRCAY-QVTACSQATVALNLLRERKgcFDVVLSDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADGRTSAVMQGI 137 89*********************.*******************************************6644.8******************* PP HTTESEEEESS--HHHHHH CS Response_reg 91 kaGakdflsKpfdpeelvk 109 + Ga d+l Kp++++el + Pd.00g1091510.m01 138 RHGACDYLIKPIHEAELKN 156 ****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 718 aa Download sequence |
MAALQRVAQS SVSTTASSYG SCKGGAASSF SAANEMAVSD RFPAGLRVLV VDDDTTCLRI 60 LEVLLGRCAY QVTACSQATV ALNLLRERKG CFDVVLSDVH MPDMDGFKLL EHVGLEMDLP 120 VIMMSADGRT SAVMQGIRHG ACDYLIKPIH EAELKNIWQH VVRKKWNGNK ELDHSGSLED 180 NDRNKRGNSD VEYTSSVNEG TEVILKGPKK RSNAKEDDDG DMENDDPSTS KKPRVVWSVE 240 LHQQFVSAVN QLGLDKAVPK RILELMNVPG LSRENVASHL QKFRLYLKRL AQQQSGISNG 300 FCGPVESNGK LGSLSRFDIQ ALAASGQIPP QTLAVLQAEL LGQPAGNLVP SMDQPAILHS 360 SLQGPKRAPV EHGVPFVQPL IKCQSNVSKH FPQSIIPAED VSSGFGSWRS NSLSTVAPSN 420 NLGGLATHNS SMLMDIMQQE QRQHKKTQQQ SVLTESSRLI NVQPSCLVVP SQSSTSFQAG 480 NSPASVNQSC SFNRSTVMDY SILSAQSNNS SLNIGHIPTG NLKTPSILDG YSAPGSVPST 540 SCSVNAGNNT SHQNSAVPFC DSRQLPGVLH DMSNIQGLYV DKSGEMLDQG PHRNLGFVGK 600 ETGIPSQFEV DDFESQVSNL NHGKIYVENN GNPVKEEPMC SLNRLLLCDL ISVPAPELGV 660 ERPSVPGTQK LRTNLICGGW RFTFMKRVRD LPKEEEQLAA KSLDIGDLIL KGISDLAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-114 | ARR-B family protein |