PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1090850.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 453aa    MW: 50037.1 Da    PI: 7.2977
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1090850.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH110.000783603813455
                        TTS-STCHHHHHHHHHHHHHHH CS
                HLH  34 pskKlsKaeiLekAveYIksLq 55 
                        +s K + a++L +A++YIk Lq
  Pd.00g1090850.m01 360 SSVKTDTASVLYEAIQYIKFLQ 381
                        68899****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    
MQLQVQGQQA LSSLHGATWD VSISSTSFTN ASNHSSLSVD SSRRLQVADQ RSASPNNDMI  60
NGEQVSDNHI WNHVLLSVNG TNDLHHNDHD VGENFLDALS SKSLSTDHVM YEPACDYLKK  120
LDNSTWEFTK YVSAASNNFN SFEKQLNGGF MENNNMNNNV NIENERLTKL SNLVSTWSIA  180
PPEPQLVMDH DHHHYLKPQA FINNDSTSCD AQMGNNNITN RNSGSSLFSC YGSKIGLNNV  240
NTMVADHHNG KYLYGNGSIL PDSYSSCGAT SAGARNFADV ISFSSRLGNK SALVDSHAPK  300
PSFKSSNLPD QYSKKQASST RVSSGRGQGI ANEGKKKRTD DTSSETVLKK PKQETSTVSS  360
SVKTDTASVL YEAIQYIKFL QDQVHVLLSS PYLKTNSHKD PWATDRKDHK GDVKVDLKNK  420
GLCLVPISCT PQVYRENTGS DYWTPTYRGC LYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.13e-35bHLH family protein