PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1090030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 338aa    MW: 37049.3 Da    PI: 7.7645
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1090030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.66.3e-3399154460
        ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                        +rY+eClkNhAa++Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+ev+ e
  Pd.00g1090030.m01  99 IRYRECLKNHAANIGGNVFDGCGEFMPS-GEEGTLEALKCAACDCHRNFHRKEVDGE 154
                        79*************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MRTSGSLSYA SSAHHLSTKE SSPAAAAAAD HQKRRVGIHN GNNTYATSPH QTLDHHIQHP  60
HPPLQPLIRD PDPDRALVGT PVPPTVLASG GPKSTSKIIR YRECLKNHAA NIGGNVFDGC  120
GEFMPSGEEG TLEALKCAAC DCHRNFHRKE VDGETTAFSP GSRRSSIMLS PLQLPPPLPS  180
PSSALHHHHH HHHQKFSMAP IIQPMNVAFG SGGGGTESSS EDLNVFQSNN AEGGLPMPPF  240
AMSKKRFRTK FTQEQKDRLM EFAEKVGWRI QKQDEEEVER FCSEVGVKRQ VLRVWMHNNK  300
NSAKKQSDIL TTPATTSLSF ENVEAEEEGG GERGRDNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.12e-57ZF-HD family protein