PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1089070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 622aa    MW: 68727.9 Da    PI: 7.769
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1089070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.33.4e-28165218155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Pd.00g1089070.m01 165 KPRVVWSLELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 218
                        79*******************.********************************8 PP
2Myb_DNA-binding391.8e-12167217148
                        TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        r  W+ e++ ++v av+qlG +   +k+I   m+ +++t++++ s++qky+
  Pd.00g1089070.m01 167 RVVWSLELHRKFVAAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 217
                        678********************************99*************7 PP
3Response_reg78.13.1e-26201281109
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                        vl vdD+p+ ++ll  +l++ +y +v++++++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+g+ +++ + +
  Pd.00g1089070.m01  20 VLAVDDDPICLKLLDALLRRCKY-HVTTTSQAITALKLLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGI 109
                        799********************.***************888888*******************87754.558******************* PP

                        HTTESEEEESS--HHHHHH CS
       Response_reg  91 kaGakdflsKpfdpeelvk 109
                          Ga d+l Kp+ +e+l +
  Pd.00g1089070.m01 110 THGACDYLLKPVRIEQLKN 128
                        ****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    
MTVEGVLDEP RDQFPIGMRV LAVDDDPICL KLLDALLRRC KYHVTTTSQA ITALKLLREN  60
KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP  120
VRIEQLKNIW QHVIRRKKVD SKDQNSCNQE KSHVGNGEGG PGSKKPRVVW SLELHRKFVA  180
AVNQLGIDKA VPKKILDLMN VEKLTRENVA SHLQKYRLYL KRISRVANQQ ANMVAALGTS  240
DSSYLRMTSV NGVGNFHPLT GPGQFHNNAF RSFPPSGMVG RLNTPAGLGL HCLPSSGMFQ  300
LSHAQNPSNS INDQPLIFPG NRNGNILPAP LELDQQHGTE AACVADFSAA INGTTVYPTS  360
SGLPDAKVFN SSNDALGLAD NPILRHTRDS EVGRNYVNQS SVSRASLRSE LSPPFLDHGR  420
LNDNWSSASQ PSMFCSNSFS SRDSFKQPTL LQSNLKDNMP VMSSQIGSCQ IDVSISCQSQ  480
DSRFGLPIQA SAISNNSGQT INNDLFQGWD DHKPDSQYPS DVMCTSMNSL MPVNDTVAPF  540
DQNSDSRRTT FQRNMGFNSI GQSNFLDPLL MKYDDVELTQ DASLKMRPGY LMDQRKLQGG  600
YNPNNVGSLD ELVSAMMKQE RR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1217226RLYLKRISRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-128ARR-B family protein