PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1088940.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 227aa MW: 25107.2 Da PI: 8.6151 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.2 | 8.3e-29 | 72 | 131 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sae+p v++ tYegeHnh Pd.00g1088940.m01 72 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQKSAENPCVLVATYEGEHNHM 131 58***************************99****************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MDSEWVNTSL GLNVIPFHPA SDDQAPVKKQ LELEGDYAKV FEGHASVKQE AAASHISRVH 60 VRTEASDTRL IVKDGYQWRK YGQKVTRDNP SPRAYYKCSF APSCPVKKKV QKSAENPCVL 120 VATYEGEHNH MHPETRAEVT LIGSISPNQQ LSPLSPSMPK RTSPVPTFSC DKNNNLSPRE 180 IEGAPPAFQQ FLVQQMASSL TKDPNFASAL AAAISGRFSD HSRMGNW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 1e-53 | WRKY family protein |