PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1087180.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 403aa    MW: 45310.6 Da    PI: 4.5585
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1087180.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.81e-34421332102
                        HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
       HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 
                        Fl+k++e++ed++++ ++sws+  nsfvv+d+++f++++Lp+yFkh nf+SF+RQLn+YgF+kv+ ++         weF+++ F  g+++l
  Pd.00g1087180.m02  42 FLTKTFEMVEDPSTDAIVSWSRARNSFVVWDSHKFSTTLLPRYFKHGNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHL 124
                        9****************************************************************999.........*************** PP

                        XXXXXXXXX CS
       HSF_DNA-bind  94 lekikrkks 102
                        l++ikr+++
  Pd.00g1087180.m02 125 LKTIKRRRH 133
                        ******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MDGVVVKEEE IVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS  60
WSRARNSFVV WDSHKFSTTL LPRYFKHGNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG  120
QRHLLKTIKR RRHVSQSMQQ EGGGGACVEL GQYGLETELE RLKRDRNVLM TEIVRLRQQQ  180
QNSKEQVMAM EGRLQTTEKK QQQIMAFLAK ALNSPSFIQN LVEKKARNKE LRGMEIGRKR  240
RLAASPSVEN LQEKPKTHVV DYSASQDQGE LETMESQIET FFSAAALDNE SSSDIIDPHS  300
SSVGGNLGIV NETTWEELWS DELIGGNPEE EVIVVGDESD IDVAVEDLVA EPADWGEDLQ  360
ELVDQMGYLI RYCMGDGQSC KGANDADRLT ETFEGFRSLN LYF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125131LKTIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-128HSF family protein