PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1086430.m02
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 432aa    MW: 46517.5 Da    PI: 5.7999
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1086430.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.3e-10274322355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Pd.00g1086430.m02 274 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 322
                        58**************************....999*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MGGHDSEDGG FQHRNEGSLN CPSSGMSTNP LPEKVSQMTM SSVSMFKPSN GADPFFGSGW  60
DPIVSLSQSD NFGGSSVVSH REFSNPPYPV ALENPGMSST SHLVQYPSDS SYVEMVPKLP  120
CFGSGSFSEM VGSFGLSECA QIANPGCAAN YNPNREGGTE RTSTIGAQSH DDHQISEEGA  180
LGSSPNGKRR KRVPESNSAF SPNKNAEGEI NKDLSGESSD YLKEQDEKKA KGEDNTAASL  240
RGKQMGKQAK ESSQSGDPKD SYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG  300
CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN IDIERILSKD ILNSRSGSGA  360
IFGFSPGISS SHPYPHGMFP GNLPSMPSSA PQFPSLPQTV LDSELQGLFH MGFDSSSAID  420
NLGQNGRLKS EL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-94bHLH family protein