PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1084970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 274aa MW: 30846.1 Da PI: 7.3677

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1084970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.9	4.2e-14	69	120	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr ++P + ++++ + a+i A++++k+L+ Pd.00g1084970.m01 69 QRMTHIAVERNRRKQMNDYLAALRAMMPAC---YAQRGDQASIIGGAINFVKELE 120 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MLNNDVGQQG FNNLSLEASM LQSVNDFETN SGPAFNRVFS STEAPAASTG RRKRRRIQNI 60 KNKEDMETQR MTHIAVERNR RKQMNDYLAA LRAMMPACYA QRGDQASIIG GAINFVKELE 120 QLLQSLEGHR RTEQQSDHLN LASIFSSFFT FPQYSTCLNS HGHGVYNSSV HPNELMAEKR 180 SAIADVEVTM VESHANVKVL MKKHPRQLLK MVLGLHSLGL MILHVNVTTA DNMILYTFSV 240 KVEDNSQLTS MNEIAADVYE MVGRIQEEAQ LLAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	58	GRRKRRRIQ
2	52	56	RKRRR
3	53	57	KRRRI
4	70	81	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	3e-69	bHLH family protein